Here comes an AI-based process to shorten drug discovery cycle

Here comes an AI-based process to shorten drug discovery cycle


Drug discovery is a painstaking process. The majority of attempts often go waste after 6-8 years of working on a drug, making it an inordinately expensive exercise. A chip design company, a US-based firm with an R&D centre in Hyderabad, claims that it has found an AI-backed method to cut the process short and save costs.

Venkat Mattela, Founder and Chief Executive Officer of Ceremorphic, said that the company has created a computer-generated cell, which mimics a human cell, making it easy for researchers to understand how it reacts when exposed to a disease or a drug.

Mattela sold his earlier venture Redpine Signals to Silicon Labs for $308 million in 2020

“The aim is to shorten the development cycle and reduce the side effects by choosing the right molecule based on new development methodology,” he told businessline here on Thursday.

“Over 90 per cent of drug candidates fail at the clinical phase-ii stage and the number of new drugs cleared by FDA every year is small. This calls for a new development methodology in the early stages of the design pipeline,” he said.

The firm has started an exclusive Life Sciences division with about 32 people to work on oncology and neurology, with over 70 per cent of them working out of its Hyderabad R&D facility. The team comprised computational biologists, chemists, computer scientists and analog hardware designers.

The company, which taped-out a 5-nanometer chip in 2022, would use a 16-nm chip to work on the drug discovery.

“Accurate AI foundation models, new algorithms and data are critical to producing successful later stage results,” he said.

“Deploying our proprietary analog circuit technology, supercomputing chips and novel AI algorithms, we developed an architecture that can predict the later stage outcomes to increase R&D efficiency,” he said.

He claimed that this innovation would transform the future of drug discovery to accelerate making personalised medicine a reality.

For the subsequent levels in drug discovery, the company plans to forge alliances with relevant life sciences companies.





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Synthesised pyrite for supercapacitors

Synthesised pyrite for supercapacitors


Researchers have synthesised highly crystalline pyrite FeS2 at low temperatures and utilised them for fabricating electrochemical energy storage devices such as batteries and high energy density supercapacitors, says a press release from the Department of Science and Technology (DST).

Transition metal sulfides (TMS) are an important class of inorganic materials and find applications in diverse fields including electrochemical energy storage devices such as batteries and supercapacitors. Solid-state synthetic methods are used to generate metal sulfides from the corresponding metal salts or their equivalent oxides usually by annealing at high temperatures.

However, the experiments were carried out by Savithri Vishwanathan, under the supervision of Dr HSS Ramakrishna Matte at the Centre for Nano and Soft Matter Sciences, Bengaluru, an autonomous institute under DST, demonstrated the low-temperature synthesis of crystalline pyrite FeS2 through a solid-state synthesis route. They have utilised a metastable oxyhydroxide (FeOOH) precursor for this process.

The team reported stabilising this intermediate oxyhydroxide and utilising it as a precursor for sulfidation, in the presence of H2S gas, for the first time in their paper published in the journal Chemical Communications.

Using a metastable precursor helped in lowering the annealing temperature, as FeOOH converted into pyrite FeS2 with fairly good crystallinity at a low temperature. This synthetic route of obtaining sulfides from their corresponding metastable oxyhydroxides can be extended to other transition metals to obtain crystalline materials in an energy intensive way.





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Powering desalination

Powering desalination


Researchers from the Indian Institute of Technology Guwahati (IIT Guwahati) led by Prof Tamal Banerjee, Department of Chemical Engineering, IIT Guwahati, have developed a heat transfer fluid based on nanofluids, which is capable of efficiently transferring heat generated using solar power to desalination systems. This advancement promises a practical solution for producing potable water from seawater, addressing the pressing issue of global water scarcity.

Heat transfer fluids are used in ‘concentrated solar power’ plants that concentrate sunlight onto a heat transfer fluid—the heat is then transferred to water to produce steam. The challenge of using CSP for desalination lies in transferring the generated heat from CSP systems to the desalination plants. Common heat transfer fluids, such as molten salts and synthetic oils, present drawbacks, including high melting points and low heat transfer efficiencies. Additionally, India’s dependence on imported heat transfer fluids escalates capital costs. To address these issues, the IIT Guwahati researchers explored the use of nanofluids, suspensions of nanoparticles in Deep Eutectic Solvent (DES), as an efficient alternative.

The researchers leveraged the exceptional thermal conductivity and stability of graphene oxide dispersed in a DES, a safe and environmentally friendly solvent. By modifying graphene oxide with an amine functionality, they achieved enhanced dispersion stability, overcoming the tendency of nanoparticles to clump together.

Elaborating on their work, Mr Nipu Kumar Das, “We developed a nanoparticle-dispersed deep eutectic solvent (NDDES) through precise mixing, demonstrating outstanding thermal conductivity and stability. This breakthrough has immense potential for sustainable energy applications, particularly in solar energy and desalination.”





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Ancient super solar storm captured in 14,000-year-old tree rings

Ancient super solar storm captured in 14,000-year-old tree rings


The sun, the singular source of energy for our planet, also occasionally sends its curses, in the form of coronal mass ejections — warning against which is one of the purposes of India’s Aditya L-1 mission.

CMEs — ejections of charged particles — are a daily occurrence that is taken care of by the earth’s magnetic field, but sometimes the storm overwhelms the magnetic field.

Scientists have discovered that one particularly brutal CME happened 14,300 years ago — from the remnants of a tree!

When particles from the sun interact with the earth’s atmosphere, they create carbon-14 or radiocarbons, which are absorbed by trees.

A team of British and French scientists (rather serendipitously) discovered an unprecedented amount of radiocarbon while analysing semi-fossilised tree rings in the Alps, according to a press release from the University of Leeds. Staring at it in disbelief, they turned to ice cores from Greenland for confirmation, measuring beryllium content in the cores.

A similar solar super-storm today could wipe out telecommunications, satellite systems and electricity grids, notes the release, emphasising the need to “prepare, build resilience” into our communications systems.

Nine such extreme solar storms — known as Miyake Events — have now been identified as having occurred over the last 15,000 years. The most recent confirmed Miyake Events occurred in 993 AD and 774 AD. This newly-identified 14,300-year-old storm is, however, the largest.





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Using breath to sniff out cancer

Using breath to sniff out cancer


Vivek Wadhwa, an entrepreneur from Silicon Valley, wants to create a portable device that will help detect cancer from breath.

“We’re opening up another dimension. Let’s see where it takes us,” says Wadhwa, whose company, Vionix Biosciences, has been working on the project.

Wadhwa has been searching for ways to reduce the cost of medical testing, particularly for diagnosing different types of cancer beyond the visible ones like throat and breast cancer. While the work outcome is filled with uncertainty, he is optimistic that they can get this technology working in the next year or two.

The device will function by converting organic compounds into light spectra, similar to how we analyse DNA sequences by deciphering the letters. “We’re looking for specific signatures within these light spectra to detect diseases and cancers,” says Wadhwa.

Lessons from the Holmes saga

The last company that was working closely on something similar to this was Theranos, founded by Elizabeth Holmes, an entrepreneur who started her long prison sentence this May following long legal battles. Theranos was a high-profile health tech company led by Holmes, aiming to revolutionise blood testing with minimal blood samples. However, it faced controversy and legal challenges due to concerns about the accuracy and credibility of the company’s methods.

“This whole field has a very bad reputation because of Theranos, and that’s why we will have externals look at our product,” says Wadhwa. “We’re going to start giving it to university researchers and let them start doing advanced research on this too,” adds Wadhwa.

Cancer testing from breath

The use of breath to detect lung cancer isn’t something new. In a research paper titled, “Lung cancer detection via breath by electronic nose enhanced with a sparse group feature selection approach,” published in 2021,scientists made a special “electronic nose” to detect lung cancer by studying people’s breath. They tested it on 87 people: 46 with lung cancer, 36 healthy and 5 with other lung problems. The machine had 13 different sensors to analyse the breath. It turned out the machine could tell lung cancer from other problems really well.

However, Wadhwa says that his research will not only help identify any form of cancer but also diseases like tuberculosis and “other diseases that can be detected through breath.”

Wadhwa, who met Prime Minister Narendra Modi this year, says that he got full support from the Prime Minister for his idea to eradicate cancer. So far, Wadhwa has invested more than $40,00,000 in the project. He intends to invest $50,00,000 more.

Analysing complex data from breath, blood, and urine using mass spectrometry is challenging for humans. AI, designed for data analysis, is ideal for this task, as it requires training to understand data and create models, says Wadhwa. However, AI needs extensive data and samples to learn about various diseases, given the complexity of the light spectrum data.

A long way to go

If this experiment is successful, this will be a new chapter in medical history. However, there are lots of challenges, and it’s too early to comment on the success of the experiment. The biggest risk is that the technology won’t work or that the data will be too complex to understand. A research paper named “Detection of cancer through exhaled breath: a systematic review” published in 2015 points out, “…analyses of exhaled breath yielded promising results, although standardisation of breath collection, sample storage, and data handling remain critical issues.”

Thus, larger studies should be implemented in true screening settings, paying particular attention to standardisation in breath collection, consideration of co-variates and validation in independent population samples.





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Elemental solution to Li-battery recycling

Elemental solution to Li-battery recycling


Lithium-ion (Li) batteries have in recent years been seen as panacea to the world’s pollution ills. Their use in electric vehicles is critical as combustion engine vehicles contribute to approximately 10 per cent of global greenhouse emissions. But has it ever struck you that Li batteries could be contributing to pollution as well?

If not properly disposed, they can reach landfills, allowing toxic metals in these batteries to leak into the soil and water, causing an environment hazard.

In comes Mini Mines, a start-up with a patented method to recycle lithium from batteries. The company, which calls itself a sustainable cleantech company, has a patented solution that helps extract minerals for reuse at lesser cost using a method called ‘Hybrid-Hydrometallurgy’.

Anupam Kumar, CEO, Mini Mines, points out that India generates about 70,000 metric tonnes of waste lithium-ion battery every year, and that countries such as China buy back these waste so as to retain control over the supply chain.

It has been possible to recycle and extract minerals used in Li-ion batteries but traditional methods are costly and not environment-friendly.

Three step process

Any mechanism that involves solvents or liquids as the base for extraction of metals is called hydrometallurgy. This has been used by mankind for about 8-9 decades. “In Hybrid-Hydrometallurgy, we take the batteries through a three step process — extraction, selective separation and beneficiation or purification,” says Kumar.

Through this process, Mini Mines is able to recover valuable spherical graphite and separate compounds such as lithium, cobalt, nickel, manganese and other metal salts in the battery.

Using organic solvents to recover metal compounds is cost-effective only when the compound is costly to mine, as in the case of thorium or uranium used in nuclear reactors. This is where aqueous media or polar media recovery systems enter the picture.

Once the batteries get dissolve in the liquid, the solution becomes ready for extraction of minerals in the solvent. Aqueous media help break the compounds down to the ionic level.

In the pre-processing, batteries are deep-discharged for safely dismantling them. This is then shred to separate the aluminium and copper in the batteries from the black mass. (Black mass is an active ingredient present on the surface of the aluminium and copper electrodes in a battery. The mass has lithium, cobalt, nickel and manganese in metal oxide or metal complex form. These are integrated with the graphite lattice structure.) These two high-quality alloys can then be used afresh for industrial applications. The black mass recovered from this indigenously designed method reduces the aluminium and copper impurities to less than 0.5 per cent combined. 

Now comes the elemental extraction part. The traditional methods use organic solvents for extracting minerals but there are so few suppliers globally that make such solvents like — Solvay and Dow Chemicals. Other than the high costs, import dependence is a deterrence. And, to extract more than five different elements, one would need different solvents, each of which has a different boiling point and properties. This maked maintanence, storage, processing in them in a controlled environment, preventing the liquid from evaporating a costly affair. Additionally, the stoichiometric balancing of the reactions make the processing more complex.

The alternative is the Hybrid-Hydrometallurgy process, says Kumar. Here, “we separate elemental compounds from the graphite without damaging the graphite lattice structure. Using organic solvents makes the graphite structure deteriorate and it becomes unusable.” Spherical graphite, he says, is a precious natural resource for India. By using a single, aqueous medium, the company is able to recover all these elemental compounds. Meanwhile, the spherical graphite doesn’t lose its structural and chemical characteristics, and can be reused in Li-ion batteries. 

The next step is to selectively separate the elemental compounds — lithium, cobalt, nickel, etc. Each metal salt or oxide has different solubility at different temperatures, pH and pressure, in an aqueous solution. By changing the temperature ramp rate, pH range and pressure gradient in such a way that only one metal starts losing its solubility and starts “sedimenting in the reactor”, only that metal starts being separated from the rest of the dissolved minerals. 

“When the metal salt loses solubility it forms a slurry which is passed through a specialised, metal selective filtration system.” In other words, the liquid has all the elements minus one. “Instead of using five different organic solvents to separate each of the five minerals, we use one solvent but use a combination of temperature gradient, pH range and pressure gradient to separate each compound one by one.”

The final step is the purification process. After selective separation, the solid that we get is in the form of crystals, which have a little moisture over them. The crystals are nothing but impurities or the residue of the liquid. These are then subjected to a series of thermal processes. Each element has a different gradient for crystallisation. For example, cobalt hydroxide/sulphate has a particular range of temperature ramping rate where only cobalt salt will crystallise. “Then this is put through a series of washing processes by different proprietary solutions that we have developed — called aqua space solutions or benificator liquid.” These wash out all the other elements and purifies the solid crystallised minerals.

“We can increase the purity in this process up to 99.99 per cent which is the analytical grade,” says Kumar.

The recovered minerals have various industrial applications such as catalyst manufacturing, metallurgy or grease manufacturing, pharmaceuticals, among others.

The company also retains a few of those recovered minerals to make a base, cathode active material, which is useful for manufacturers of sodium-ion and lithium-ion cells. After recovery, Kumar says, Mini Mines combines these minerals in a certain ratio to make it useful for the cell manufacturers. 

The company’s original process ended at the elemental recovery stage. But the cathode active material is “a universe in itself” and a cell manufacturer is likely not able to do it themselves. “So we decided to forward integrate our recovered material, because having the source of these minerals after the recovery makes the forward integration easy, as we can control the purity, crystal structure and processing parameters at the source itself,” says Kumar.

He also points out that the process does not merely help reuse Li-ion batteries but actually regenerate these metals so that they can be reused in any chosen application such as in upcoming sodium ion battery plants. The company has also designed its machines indigenously, he says.

Effective and efficient

What would the costs savings be with Mini Mines’ process versus traditional methods? Kumar claims savings of 50-53 per cent reduction in costs compared with the mining process. If you consider other processes than solvent extraction, those can’t even recover elemental compounds, they recover an amalgam, he points out. That makes it difficult and costly to separate select elements out.

In terms of capital expenditure, the cost could be up to 66 per cent higher in traditional methods.

He explains: For one tonne of lithium ore, we can recover 2-7 kg of lithium hydroxide or lithium carbonate depending on the available quantities in the source batteires. When we recycle one tonne of lithium-ion batteries, we recover approximately 18-32 kg of lithium hydroxide or carbonate. Using organic solvents, it is possible to recover the same amount of lithium but the cost of doing that would be higher than even mining from the ores. Additionally the organic waste generated damages the environment.

The conventional recycling and mining of Lithium-ion battery raw materials are highly expensive, water and energy-intensive processes. Mini Mines’ hybrid-hydrometallurgy process reduces direct carbon dioxide emissions by 1.5 tonnes with every tonne of Lithium-ion battery recycled. The innovative process also saves approximately 2,00,000 liters of water for every tonne of the battery recycled. This process is a zero-liquid discharge process i.e. we do not create any kind of solid, liquid, or gaseous waste in the process, Kumar points out.

The company has also developed a proprietary solution so that when the Li-battery is dismantled, it does not catch fire. The solution deep discharges the Li-ion batteries and stabilises the Li+ ion. It combines with the Li+ and helps in the recovery of the lithium at the recovery stage. Favourable economics beckons the recycling industry. 





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